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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85809.1KEGG: dia:Dtpsy_1212 protein of unknown function DUF161; manually curated; PFAM: Protein of unknown function DUF161. (208 aa)    
Predicted Functional Partners:
AEB85810.1
KEGG: dia:Dtpsy_1211 hypothetical protein.
       0.732
AEB85811.1
PFAM: Blue (type 1) copper domain; KEGG: ajs:Ajs_2601 blue (type1) copper domain-containing protein.
       0.510
AEB85808.1
TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: ajs:Ajs_2594 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase.
       0.495
AEB85812.1
PFAM: Protein of unknown function DUF411; KEGG: dia:Dtpsy_1206 protein of unknown function DUF411.
       0.463
AEB85813.1
PFAM: Peptidase S58, DmpA; KEGG: ajs:Ajs_2605 peptidase S58, DmpA.
       0.403
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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