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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85817.1KEGG: ajs:Ajs_2610 peptidase M14, carboxypeptidase A; PFAM: Peptidase M14, carboxypeptidase A; SMART: Peptidase M14, carboxypeptidase A. (616 aa)    
Predicted Functional Partners:
AEB85806.1
PFAM: Domain of unknown function DUF140; KEGG: dia:Dtpsy_1216 protein of unknown function DUF140.
  
     0.751
AEB86708.1
PFAM: Cation/H+ exchanger; KEGG: dia:Dtpsy_0347 sodium/hydrogen exchanger.
  
  
 0.735
AEB84643.1
PFAM: Phosphoesterase, DHHA1; KEGG: ajs:Ajs_2502 phosphoesterase, DHHA1.
  
     0.709
AEB85805.1
KEGG: dia:Dtpsy_1217 mammalian cell entry related domain protein.
  
     0.675
AEB85170.1
Trypsin; PFAM: Peptidase S1/S6, chymotrypsin/Hap; KEGG: mmu:16621 kallikrein B, plasma 1; SMART: Peptidase S1/S6, chymotrypsin/Hap.
  
 
 0.658
AEB83180.1
PFAM: Porin, Gram-negative type; KEGG: dia:Dtpsy_0662 porin gram-negative type.
  
     0.650
rhlE
DEAD/DEAH box helicase domain protein; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.
     
 0.630
AEB84562.1
KEGG: dia:Dtpsy_2195 hypothetical protein.
 
     0.563
AEB82637.1
PFAM: Transposase IS3/IS911family; KEGG: rfr:Rfer_2709 transposase IS3/IS911.
  
     0.547
AEB82813.1
PFAM: Transposase IS3/IS911family; KEGG: rfr:Rfer_2709 transposase IS3/IS911.
  
     0.547
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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