STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85825.1Formyl-CoA transferase; KEGG: dia:Dtpsy_2408 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family. (413 aa)    
Predicted Functional Partners:
AEB85824.1
KEGG: dia:Dtpsy_2407 acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1.
 
 
  0.972
AEB84244.1
Formyl-CoA transferase; KEGG: bbr:BB4584 hypothetical protein; PFAM: CoA-transferase family III.
  
  
 
0.903
AEB84095.1
TIGRFAM: Succinic semialdehyde dehydrogenase; KEGG: dac:Daci_2346 succinic semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; Belongs to the aldehyde dehydrogenase family.
    
  0.902
AEB86102.1
PFAM: Aldehyde dehydrogenase domain; KEGG: dia:Dtpsy_0944 aldehyde dehydrogenase.
    
  0.902
AEB82624.1
Formyl-CoA transferase; KEGG: dia:Dtpsy_0151 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
  
  
 
0.901
AEB85372.1
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
     
 0.900
AEB85826.1
KEGG: ajs:Ajs_2981 hypothetical protein.
  
    0.579
AEB85823.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ajs:Ajs_2978 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.405
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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