Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEB85836.1PFAM: Uncharacterised protein family UPF0249/HpnK; KEGG: vap:Vapar_5574 YdjC family protein. (288 aa)    
Predicted Functional Partners:
AEB85837.1
PFAM: GtrA-like protein; KEGG: axy:AXYL_00714 GtrA-like protein.
 
     0.904
AEB85838.1
PFAM: Glycosyl transferase, family 39; KEGG: dac:Daci_2190 glycosyl transferase family protein.
 
  
 0.786
AEB85839.1
PFAM: Glycosyl transferase, family 2; KEGG: vap:Vapar_5572 glycosyl transferase family 2.
 
  
 0.740
AEB82859.1
Glycosyltransferase; KEGG: dia:Dtpsy_0402 glycosyltransferase.
 
  
 0.645
AEB84606.1
KEGG: cph:Cpha266_0350 glycosyl transferase family protein; manually curated; PFAM: Glycosyl transferase, family 2.
 
  
 0.620
AEB82860.1
PFAM: Glycosyl transferase, family 2; KEGG: ajs:Ajs_0411 glycosyl transferase family protein.
 
  
 0.572
AEB85305.1
KEGG: gdj:Gdia_1658 hypothetical protein.
 
   
 0.416
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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