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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85837.1PFAM: GtrA-like protein; KEGG: axy:AXYL_00714 GtrA-like protein. (136 aa)    
Predicted Functional Partners:
AEB85836.1
PFAM: Uncharacterised protein family UPF0249/HpnK; KEGG: vap:Vapar_5574 YdjC family protein.
 
     0.894
AEB85838.1
PFAM: Glycosyl transferase, family 39; KEGG: dac:Daci_2190 glycosyl transferase family protein.
 
   
 0.745
AEB82859.1
Glycosyltransferase; KEGG: dia:Dtpsy_0402 glycosyltransferase.
 
   
 0.732
AEB83495.1
KEGG: rfr:Rfer_0701 hypothetical protein.
 
     0.618
AEB82861.1
KEGG: ajs:Ajs_0412 hypothetical protein.
 
  
 0.616
AEB85839.1
PFAM: Glycosyl transferase, family 2; KEGG: vap:Vapar_5572 glycosyl transferase family 2.
 
  
 0.543
AEB83108.1
TIGRFAM: Conserved hypothetical protein CHP03016, PEP-CTERM; KEGG: rfr:Rfer_0661 hypothetical protein.
  
     0.529
AEB84896.1
PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: dia:Dtpsy_1743 tripartite ATP-independent periplasmic transporter DctQ component.
  
     0.520
AEB84031.1
KEGG: pol:Bpro_1263 hypothetical protein.
  
     0.473
AEB86146.1
PFAM: O-antigen ligase-related; KEGG: dia:Dtpsy_2960 O-antigen polymerase.
 
    0.457
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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