STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85838.1PFAM: Glycosyl transferase, family 39; KEGG: dac:Daci_2190 glycosyl transferase family protein. (525 aa)    
Predicted Functional Partners:
AEB85839.1
PFAM: Glycosyl transferase, family 2; KEGG: vap:Vapar_5572 glycosyl transferase family 2.
 
  
 0.967
AEB82860.1
PFAM: Glycosyl transferase, family 2; KEGG: ajs:Ajs_0411 glycosyl transferase family protein.
 
  
 0.892
AEB84606.1
KEGG: cph:Cpha266_0350 glycosyl transferase family protein; manually curated; PFAM: Glycosyl transferase, family 2.
 
  
 0.812
AEB85836.1
PFAM: Uncharacterised protein family UPF0249/HpnK; KEGG: vap:Vapar_5574 YdjC family protein.
 
  
 0.757
AEB85837.1
PFAM: GtrA-like protein; KEGG: axy:AXYL_00714 GtrA-like protein.
 
   
 0.745
AEB83140.1
KEGG: azo:azo0349 putative small multi-drug resistant family protein.
 
  
 0.724
AEB83693.1
Glutamine--scyllo-inositol transaminase; KEGG: mpt:Mpe_A0607 lipopolysaccharide biosynthesis protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.553
lpxA
Acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
   
 0.527
lpxB
Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
   
 0.494
AEB83121.1
PFAM: Polysaccharide deacetylase; KEGG: neu:NE0847 hypothetical protein.
 
  
 0.489
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.