Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEB85839.1PFAM: Glycosyl transferase, family 2; KEGG: vap:Vapar_5572 glycosyl transferase family 2. (326 aa)    
Predicted Functional Partners:
AEB85838.1
PFAM: Glycosyl transferase, family 39; KEGG: dac:Daci_2190 glycosyl transferase family protein.
 
  
 0.968
AEB85836.1
PFAM: Uncharacterised protein family UPF0249/HpnK; KEGG: vap:Vapar_5574 YdjC family protein.
 
  
 0.740
AEB86525.1
Glycosyl transferase family 2; KEGG: psa:PST_1402 hypothetical protein; manually curated; PFAM: Glycosyl transferase, family 2; Capsule polysaccharide biosynthesis.
 
  
 0.673
AEB83693.1
Glutamine--scyllo-inositol transaminase; KEGG: mpt:Mpe_A0607 lipopolysaccharide biosynthesis protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.560
AEB83140.1
KEGG: azo:azo0349 putative small multi-drug resistant family protein.
 
  
 0.538
AEB85837.1
PFAM: GtrA-like protein; KEGG: axy:AXYL_00714 GtrA-like protein.
 
  
 0.527
pcnB
poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
   0.501
AEB85842.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: dia:Dtpsy_2419 HAD-superfamily subfamily IB hydrolase, TIGR01490.
     
 0.488
AEB85843.1
DnaA regulatory inactivator Hda; KEGG: aav:Aave_1971 chromosomal replication initiator, DnaA; TIGRFAM: Chromosomal replication control, regulator Hda; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Belongs to the DnaA family.
     
 0.486
AEB83104.1
TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: rfr:Rfer_0711 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; Nucleotidyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.478
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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