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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85865.1PFAM: Protein of unknown function DUF3579; KEGG: dia:Dtpsy_2428 hypothetical protein. (104 aa)    
Predicted Functional Partners:
AEB86758.1
KEGG: dia:Dtpsy_3259 glutamate/cysteine ligase; TIGRFAM: Glutamate--cysteine ligase GshA; PFAM: Glutamate--cysteine ligase GshA.
  
     0.716
AEB82675.1
KEGG: ajs:Ajs_0183 hypothetical protein.
  
     0.713
AEB86246.1
PFAM: Protein of unknown function DUF1841; KEGG: ajs:Ajs_3553 hypothetical protein.
  
     0.693
AEB86343.1
PFAM: Uncharacterised conserved protein UCP019883, membrane; KEGG: dia:Dtpsy_0886 putative transmembrane protein.
  
     0.676
AEB85617.1
KEGG: dia:Dtpsy_1366 phasin family protein; TIGRFAM: Phasin, subfamily 1; PFAM: Phasin.
  
     0.630
AEB84583.1
KEGG: dia:Dtpsy_2283 succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit.
  
     0.617
AEB83203.1
ResB family protein; PFAM: Cytochrome c biogenesis protein; KEGG: dia:Dtpsy_0691 ResB family protein.
  
     0.597
AEB84582.1
KEGG: aav:Aave_2203 succinate dehydrogenase subunit D; TIGRFAM: Succinate dehydrogenase, hydrophobic membrane anchor; PFAM: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit.
  
     0.558
AEB83848.1
PFAM: Protein of unknown function DUF2069, membrane; KEGG: dia:Dtpsy_1118 membrane protein-like protein.
  
     0.542
AEB82776.1
KEGG: dia:Dtpsy_0266 putative transmembrane protein.
 
     0.529
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.