STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
kynBArylformamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. (215 aa)    
Predicted Functional Partners:
AEB83453.1
Formate dehydrogenase, alpha subunit; SMART: Molybdopterin oxidoreductase, Fe4S4 domain; TIGRFAM: Formate dehydrogenase, alpha subunit; KEGG: dia:Dtpsy_2797 formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; Ferredoxin; 4Fe-4S binding domain; Molydopterin dinucleotide-binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.903
AEB83459.1
PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; Molydopterin dinucleotide-binding domain; KEGG: dia:Dtpsy_2791 molybdopterin oxidoreductase; SMART: Molybdopterin oxidoreductase, Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.903
AEB83452.1
KEGG: dia:Dtpsy_2798 respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding.
     
  0.900
AEB83460.1
PFAM: 4Fe-4S binding domain; KEGG: dia:Dtpsy_2790 4Fe-4S ferredoxin iron-sulfur binding domain protein.
     
  0.900
AEB83462.1
KEGG: ajs:Ajs_3461 formate dehydrogenase gamma subunit; TIGRFAM: Formate dehydrogenase, gamma subunit; PFAM: Cytochrome b/b6, N-terminal.
     
  0.900
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
 
  0.807
AEB86082.1
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.806
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
    
  0.804
pckG
Phosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.
     
  0.800
AEB83739.1
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); PFAM: Phosphate acetyl/butaryl transferase; Malic enzyme, NAD-binding; Malic enzyme, N-terminal; KEGG: ajs:Ajs_1112 malic enzyme; SMART: Malic enzyme, NAD-binding.
     
  0.800
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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