STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85891.1PFAM: Basic membrane lipoprotein; KEGG: dia:Dtpsy_2444 basic membrane lipoprotein. (381 aa)    
Predicted Functional Partners:
AEB85894.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: dia:Dtpsy_2447 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 
 0.996
AEB85892.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: dia:Dtpsy_2445 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.993
AEB85893.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: dia:Dtpsy_2446 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.993
AEB85890.1
PFAM: Basic membrane lipoprotein; KEGG: dia:Dtpsy_2443 basic membrane lipoprotein.
 
  
 
0.969
AEB86649.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: azc:AZC_1416 sugar ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
 
     0.531
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.435
AEB83762.1
PFAM: Protein of unknown function DUF989; KEGG: ajs:Ajs_1128 hypothetical protein.
 
     0.412
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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