STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85953.1KEGG: dia:Dtpsy_2668 carboxymethylenebutenolidase; PFAM: Dienelactone hydrolase. (294 aa)    
Predicted Functional Partners:
AEB82765.1
KEGG: dia:Dtpsy_0255 carboxymethylenebutenolidase; PFAM: Dienelactone hydrolase.
  
  
 
0.924
AEB85952.1
PFAM: Zinc/iron permease; KEGG: dia:Dtpsy_2667 zinc/iron permease.
  
  
 0.606
AEB83467.1
KEGG: ajs:Ajs_3456 hypothetical protein.
  
  
 0.594
AEB85954.1
Enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; KEGG: bpt:Bpet4160 putative enoyl-CoA hydratase.
     
 0.556
AEB85955.1
KEGG: bpt:Bpet4161 acyl-CoA transferase/carnitine dehydratase; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
  
  
 0.523
AEB85956.1
KEGG: bpt:Bpet4162 putative secreted protein.
       0.455
AEB86223.1
KEGG: app:CAP2UW1_1324 oxidoreductase FAD-binding domain protein; PFAM: Oxidoreductase, FAD-binding domain; Ferredoxin; Cytochrome b/b6, N-terminal; Oxidoreductase FAD/NAD(P)-binding.
 
 
 0.432
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
    0.428
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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