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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85958.1PFAM: Carboxymuconolactone decarboxylase; KEGG: axy:AXYL_04995 alkylhydroperoxidase AhpD family core domain-containing protein 7. (174 aa)    
Predicted Functional Partners:
AEB85959.1
KEGG: dac:Daci_0250 hypothetical protein.
       0.723
AEB85960.1
3-oxoacyl-(acyl-carrier-protein) reductase; KEGG: axy:AXYL_00411 short chain dehydrogenase family protein 3; PFAM: Short-chain dehydrogenase/reductase SDR.
 
   
 0.700
AEB86590.1
2,4-dichlorophenol 6-monooxygenase; KEGG: reu:Reut_B4679 monooxygenase, FAD-binding; PFAM: Monooxygenase, FAD-binding.
  
     0.549
AEB85961.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: axy:AXYL_00410 LysR family regulatory helix-turn-helix protein 12.
   
 
 0.528
AEB86643.1
Peptidase S15; KEGG: cwo:Cwoe_3936 peptidase S15.
 
     0.403
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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