STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB85971.1PFAM: Protein of unknown function DUF2149; KEGG: dia:Dtpsy_2683 hypothetical protein. (107 aa)    
Predicted Functional Partners:
AEB85972.1
KEGG: gpb:HDN1F_26000 hypothetical protein.
 
  
 0.990
AEB85974.1
Cobaltochelatase; KEGG: dia:Dtpsy_2685 cobaltochelatase; PFAM: CobN/magnesium chelatase.
 
  
 0.879
AEB85975.1
PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: dia:Dtpsy_2686 TonB-dependent receptor plug.
 
  
 0.625
AEB85973.1
KEGG: lma:LmjF27.0240 kinetoplast-associated protein-like protein.
       0.590
AEB83144.1
KEGG: ctt:CtCNB1_3962 hypothetical protein.
  
     0.510
AEB86356.1
Cell wall hydrolase/autolysin; KEGG: ajs:Ajs_0983 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic.
   
    0.495
AEB86564.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: ctt:CtCNB1_0607 TonB-dependent receptor.
 
  
 0.416
AEB86100.1
KEGG: dia:Dtpsy_0952 putative transmembrane protein.
   
  
 0.405
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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