Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB85975.1PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: dia:Dtpsy_2686 TonB-dependent receptor plug. (651 aa)    
Predicted Functional Partners:
AEB85184.1
KEGG: dia:Dtpsy_1442 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal.
 
 
 0.809
AEB85974.1
Cobaltochelatase; KEGG: dia:Dtpsy_2685 cobaltochelatase; PFAM: CobN/magnesium chelatase.
 
  
 0.769
AEB83760.1
KEGG: dia:Dtpsy_1044 hypothetical protein.
  
 
 0.755
AEB86141.1
TonB family protein; TIGRFAM: TonB, C-terminal; KEGG: ajs:Ajs_3655 TonB family protein.
  
 
 0.755
AEB85003.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease protein; KEGG: dac:Daci_4649 transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.667
AEB83128.1
KEGG: hse:Hsero_2760 hypothetical protein.
   
 
 0.647
AEB85971.1
PFAM: Protein of unknown function DUF2149; KEGG: dia:Dtpsy_2683 hypothetical protein.
 
  
 0.624
AEB83543.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease protein; KEGG: dia:Dtpsy_1016 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.618
AEB82894.1
KEGG: ajs:Ajs_0447 hypothetical protein.
   
 
 0.611
AEB84158.1
PFAM: NHL repeat; KEGG: phe:Phep_1359 NHL repeat containing protein.
   
 
 0.611
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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