STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
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[Homology]
Score
AEB85977.1Taurine-transporting ATPase; PFAM: ABC transporter-like; KEGG: dia:Dtpsy_2681 ABC transporter related; SMART: ATPase, AAA+ type, core. (286 aa)    
Predicted Functional Partners:
AEB85978.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_2682 binding-protein-dependent transport systems inner membrane component.
 
 0.988
AEB85979.1
KEGG: dia:Dtpsy_2687 putative periplasmic component of ABC-type transport system.
 
 
 0.960
AEB84077.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: xtr:100494207 probable ABC transporter permease protein BruAb2_1124-like.
 
 
 0.923
AEB84076.1
KEGG: aav:Aave_2969 substrate-binding region of ABC-type glycine betaine transport system.
  
 
 0.799
AEB85508.1
Hypothetical protein; KEGG: aav:Aave_2648 putative signal peptide protein.
  
 
 0.799
AEB85980.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dia:Dtpsy_2688 TonB-dependent receptor.
  
  
 0.746
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
     0.605
AEB85976.1
NnrS family protein; PFAM: NnrS; KEGG: dia:Dtpsy_2680 NnrS family protein.
 
    0.595
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
    0.564
AEB85981.1
KEGG: dia:Dtpsy_2689 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp.
     
 0.554
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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