Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB85990.1TIGRFAM: Muconolactone delta-isomerase; KEGG: mno:Mnod_2374 muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase. (92 aa)    
Predicted Functional Partners:
AEB86413.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: dac:Daci_0909 carboxymuconolactone decarboxylase.
 
 
 0.923
AEB82516.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: axy:AXYL_01971 carboxymuconolactone decarboxylase family protein 2.
     
  0.900
AEB86821.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: pol:Bpro_2144 carboxymuconolactone decarboxylase.
     
  0.900
AEB85989.1
SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; KEGG: lch:Lcho_0832 3-oxoacid CoA-transferase, B subunit; PFAM: Coenzyme A transferase.
  
  
 0.779
AEB85830.1
Ferredoxin--NAD(+) reductase; KEGG: dia:Dtpsy_2414 CDP-6-deoxy-delta-3,4-glucoseen reductase; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase, FAD-binding domain; Ferredoxin.
 
  
 0.758
AEB85991.1
Beta-lactamase domain protein; KEGG: reu:Reut_A1508 beta-lactamase-like; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like.
       0.748
AEB85988.1
SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: rpf:Rpic12D_2066 3-oxoacid CoA-transferase, A subunit; PFAM: Coenzyme A transferase.
 
  
 0.747
AEB86223.1
KEGG: app:CAP2UW1_1324 oxidoreductase FAD-binding domain protein; PFAM: Oxidoreductase, FAD-binding domain; Ferredoxin; Cytochrome b/b6, N-terminal; Oxidoreductase FAD/NAD(P)-binding.
 
  
 0.743
AEB85986.1
PFAM: YCII-related; KEGG: cti:RALTA_B1424 YciI-like protein.
 
    0.735
AEB85355.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bpt:Bpet1402 transcriptional regulator CatR; Belongs to the LysR transcriptional regulatory family.
  
   
 0.609
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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