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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86012.1PFAM: Putitive phosphate transport regulator; KEGG: dia:Dtpsy_2707 protein of unknown function DUF47. (215 aa)    
Predicted Functional Partners:
AEB86011.1
PFAM: Phosphate transporter; KEGG: dia:Dtpsy_2706 phosphate transporter.
 
  
 0.990
rpmB
TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: ctt:CtCNB1_0883 ribosomal protein L28; PFAM: Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
    0.529
AEB87046.1
Ribonuclease P protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
    0.497
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
    0.489
AEB85475.1
PFAM: Protein of unknown function DUF3619; KEGG: dia:Dtpsy_1955 putative transmembrane protein.
  
     0.474
AEB86013.1
KEGG: aav:Aave_1879 OmpA domain-containing protein.
       0.463
AEB85020.1
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
    
 0.456
AEB83207.1
KEGG: dia:Dtpsy_0695 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like.
   
    0.400
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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