Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEB86020.1KEGG: dia:Dtpsy_2714 integron integrase; TIGRFAM: Integrase, integron-type; PFAM: Integrase, catalytic core, phage; Belongs to the 'phage' integrase family. (332 aa)    
Predicted Functional Partners:
AEB86019.1
AAA ATPase central domain protein; KEGG: xtr:100494158 replication-associated recombination protein A-like; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core.
 
     0.817
AEB84529.1
Integrase family protein; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: bpt:Bpet1498 putative integrase/recombinase; Belongs to the 'phage' integrase family.
  
     0.571
AEB86021.1
KEGG: syc:syc1951_c hypothetical protein; manually curated; PFAM: Cupin 2, conserved barrel.
       0.509
xerC
Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
 
 
 
0.468
AEB86018.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: dia:Dtpsy_2712 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.445
AEB86017.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: dia:Dtpsy_2711 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.428
AEB86015.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: ajs:Ajs_3361 ABC transporter related; SMART: ATPase, AAA+ type, core.
       0.400
AEB86016.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: dia:Dtpsy_2710 ABC transporter related; SMART: ATPase, AAA+ type, core.
       0.400
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.