STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86022.1PDZ/DHR/GLGF domain protein; KEGG: pen:PSEEN2126 hypothetical protein; PFAM: PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF. (295 aa)    
Predicted Functional Partners:
AEB83674.1
Protease Do; SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: dia:Dtpsy_2624 protease Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; Belongs to the peptidase S1C family.
     
  0.900
AEB86219.1
Protease Do; SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: aav:Aave_3965 protease Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; Belongs to the peptidase S1C family.
     
  0.900
AEB83672.1
PFAM: Anti sigma-E protein RseA, N-terminal; KEGG: dia:Dtpsy_2626 anti sigma-E protein, RseA.
  
 
 0.626
AEB86023.1
HNH endonuclease; KEGG: hch:HCH_04433 restriction endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease.
       0.585
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.513
AEB83253.1
KEGG: ajs:Ajs_0769 putative transmembrane protein.
 
 
 0.485
AEB84046.1
Catalase; KEGG: gpb:HDN1F_12050 catalase; PFAM: Catalase-related subgroup; Catalase-related immune responsive; Belongs to the catalase family.
   
 0.441
AEB86024.1
KEGG: dia:Dtpsy_2715 protein of unknown function DUF1010; manually curated; PFAM: Protein of unknown function DUF1010.
       0.440
AEB85624.1
PRTRC system protein D; TIGRFAM: ParB-related, ThiF-related cassette, protein D; KEGG: ajs:Ajs_1600 hypothetical protein.
 
 
 0.430
AEB85120.1
KEGG: ajs:Ajs_1596 hypothetical protein; TIGRFAM: ParB-related, ThiF-related cassette, protein A; PFAM: Domain of unknown function DUF2016.
   
 0.427
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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