Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AEB86030.1PFAM: Protein of unknown function DUF2091, periplasmic; KEGG: ctt:CtCNB1_3965 hypothetical protein. (101 aa)    
Predicted Functional Partners:
AEB86032.1
KEGG: dia:Dtpsy_2718 uracil-DNA glycosylase superfamily.
       0.511
AEB86031.1
Hypothetical protein.
       0.494
AEB84932.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: dia:Dtpsy_2312 protein of unknown function DUF214.
    
   0.474
AEB86033.1
PFAM: UbiA prenyltransferase; KEGG: eba:ebA3963 1,4-dihydroxy-2-naphthoate octaprenyltransferase.
       0.453
AEB85531.1
KEGG: app:CAP2UW1_0424 hypothetical protein.
    
   0.429
AEB86512.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.429
AEB84653.1
KEGG: dia:Dtpsy_2105 hypothetical protein.
    
   0.424
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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