Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB86048.1KEGG: vap:Vapar_1266 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI. (340 aa)    
Predicted Functional Partners:
AEB83225.1
KEGG: ajs:Ajs_0741 glutamate synthase (NADH) large subunit; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
    
 
 0.864
AEB86049.1
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: vap:Vapar_1265 extracellular solute-binding protein family 1.
 
   
 0.802
AEB82799.1
KEGG: dia:Dtpsy_0291 phosphocarrier, HPr family; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; PFAM: Phosphotransferase system, phosphocarrier HPr protein.
   
 
 0.780
AEB86051.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_1263 binding-protein-dependent transport systems inner membrane component.
 
   
 0.768
AEB86050.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_1264 binding-protein-dependent transport systems inner membrane component.
 
     0.750
AEB86652.1
PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: azc:AZC_1419 ABC transporter sugar-binding protein.
 
  
 0.738
AEB86650.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: reu:Reut_B4134 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.712
AEB86651.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: reu:Reut_B4135 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.700
cpdA
Metallophosphoesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
   
 0.698
AEB86052.1
Polyamine-transporting ATPase; PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: vap:Vapar_1262 ABC transporter related; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
 
   
 0.682
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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