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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86063.1PFAM: Protein of unknown function DUF112, transmembrane; KEGG: ajs:Ajs_3411 hypothetical protein. (503 aa)    
Predicted Functional Partners:
AEB86064.1
KEGG: dia:Dtpsy_2746 protein of unknown function DUF1468.
  
  
 0.921
AEB84486.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: ajs:Ajs_1644 hypothetical protein.
  
  
 
0.907
AEB82582.1
KEGG: reh:H16_A2153 extra-cytoplasmic solute receptor.
 
  
 0.850
AEB82762.1
Hypothetical protein; KEGG: cti:RALTA_B0858 conserved hypothetical protein; UPF0065.
 
  
 0.850
AEB83198.1
Hypothetical protein; KEGG: cti:RALTA_B1946 conserved hypothetical protein UPF0065.
  
 0.850
AEB83576.1
KEGG: vap:Vapar_5507 hypothetical protein.
  
 0.850
AEB83928.1
KEGG: bbr:BB0625 hypothetical protein.
 
  
 0.850
AEB84484.1
KEGG: dia:Dtpsy_2072 hypothetical protein.
 
  
 0.850
AEB84837.1
KEGG: axy:AXYL_01255 extra-cytoplasmic solute receptor family protein 24.
  
 0.850
AEB84874.1
KEGG: xtr:100486988 UPF0065 protein in tcbD-tcbE intergenic region-like.
  
 0.850
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.