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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86079.1PFAM: ABC-type glycine betaine transport system, substrate-binding domain; KEGG: dia:Dtpsy_0979 glycine betaine transporter periplasmic subunit. (336 aa)    
Predicted Functional Partners:
AEB86077.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit; KEGG: ajs:Ajs_1065 glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Cystathionine beta-synthase, core.
 
 0.999
AEB86078.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_0980 binding-protein-dependent transport systems inner membrane component.
 
 0.999
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
  
 0.503
AEB83066.1
KEGG: dia:Dtpsy_0589 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
  
  
 0.466
AEB86125.1
KEGG: rfr:Rfer_1524 amino acid ABC transporter permease; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
  
  0.454
AEB86080.1
KEGG: dia:Dtpsy_0976 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain.
       0.451
AEB82756.1
KEGG: ajs:Ajs_0250 hypothetical protein; TIGRFAM: Domain of unknown function DUF140; PFAM: Domain of unknown function DUF140.
     
 0.426
AEB83234.1
KEGG: dia:Dtpsy_0717 protein of unknown function DUF140; TIGRFAM: Domain of unknown function DUF140; PFAM: Domain of unknown function DUF140.
     
 0.426
AEB85806.1
PFAM: Domain of unknown function DUF140; KEGG: dia:Dtpsy_1216 protein of unknown function DUF140.
     
 0.426
AEB85765.1
Polyamine-transporting ATPase; PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: dac:Daci_4799 ABC transporter-like protein; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
    
 0.421
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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