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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86084.1PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: dia:Dtpsy_0971 peptidase U62 modulator of DNA gyrase. (473 aa)    
Predicted Functional Partners:
AEB86149.1
PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: dia:Dtpsy_2956 peptidase U62 modulator of DNA gyrase.
 
 
0.906
AEB86085.1
Uncharacterized protein family UPF0307; PFAM: Ribosome-associated, YjgA; KEGG: dia:Dtpsy_0970 protein of unknown function DUF615; Belongs to the UPF0307 family.
  
    0.647
AEB86086.1
TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin binding; KEGG: ajs:Ajs_1051 molybdopterin adenylyltransferase; SMART: Molybdopterin binding.
       0.610
zapD
Protein of unknown function DUF1342; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.
  
     0.473
AEB86087.1
PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; KEGG: dia:Dtpsy_0967 alcohol dehydrogenase zinc-binding domain protein; SMART: Polyketide synthase, enoylreductase.
     
 0.438
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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