STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86109.1PFAM: Methyltransferase type 11; KEGG: dia:Dtpsy_0925 methyltransferase type 12. (176 aa)    
Predicted Functional Partners:
dapA-3
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
     
 0.780
AEB83631.1
Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: dac:Daci_4972 metallophosphoesterase.
   
   0.723
AEB86111.1
NlpBDapX family lipoprotein; PFAM: Lipoprotein, NlpB; KEGG: ajs:Ajs_1009 NlpB/DapX family lipoprotein.
       0.664
AEB83900.1
KEGG: bur:Bcep18194_C6760 hypothetical protein.
  
     0.635
AEB85488.1
KEGG: ajs:Ajs_1755 hypothetical protein.
  
     0.577
AEB84881.1
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
  
  
 0.542
AEB84495.1
PFAM: Alpha/beta hydrolase fold-1; KEGG: ajs:Ajs_1655 alpha/beta hydrolase fold.
  
   
 0.521
AEB86107.1
KEGG: dia:Dtpsy_0927 major facilitator superfamily MFS_1; manually curated; PFAM: Major facilitator superfamily MFS-1.
     
 0.497
queF
7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
    
 
 0.460
AEB84508.1
PFAM: Thioredoxin domain; KEGG: dia:Dtpsy_1244 hypothetical protein.
 
 
 0.420
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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