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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86192.1ATP-dependent transcriptional regulator, MalT-like, LuxR family; KEGG: reu:Reut_B3844 regulatory protein, LuxR; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal. (911 aa)    
Predicted Functional Partners:
AEB86190.1
UspA domain-containing protein; PFAM: UspA; Haemerythrin/HHE cation-binding motif; KEGG: reu:Reut_B3843 hypothetical protein.
 
     0.796
AEB86186.1
PFAM: Major facilitator superfamily MFS-1; KEGG: bph:Bphy_7178 major facilitator transporter.
 
     0.788
AEB86193.1
PFAM: Protein of unknown function DUF1302; KEGG: lch:Lcho_2162 hypothetical protein.
 
    0.780
AEB86188.1
KEGG: bph:Bphy_7176 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA.
 
     0.757
AEB86187.1
PFAM: Protein of unknown function DUF849, prokaryotic; KEGG: reu:Reut_A0020 hypothetical protein.
 
     0.720
AEB83149.1
KEGG: vap:Vapar_3422 hypothetical protein.
 
     0.715
AEB86194.1
PFAM: Protein of unknown function DUF1329; KEGG: lch:Lcho_2163 hypothetical protein.
 
    0.648
AEB86195.1
KEGG: psa:PST_0617 glycosyl hydrolase.
 
   
 0.548
AEB86185.1
PFAM: Protein of unknown function DUF1234; KEGG: bge:BC1002_3447 protein of unknown function DUF1234.
 
     0.533
AEB86191.1
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bge:BC1002_3448 Rieske (2Fe-2S) iron-sulfur domain protein.
     
 0.525
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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