Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEB86193.1PFAM: Protein of unknown function DUF1302; KEGG: lch:Lcho_2162 hypothetical protein. (578 aa)    
Predicted Functional Partners:
AEB86194.1
PFAM: Protein of unknown function DUF1329; KEGG: lch:Lcho_2163 hypothetical protein.
 
  
 0.989
AEB86195.1
KEGG: psa:PST_0617 glycosyl hydrolase.
 
    0.924
AEB86196.1
KEGG: psa:PST_0618 transporter, putative.
 
    0.884
AEB86192.1
ATP-dependent transcriptional regulator, MalT-like, LuxR family; KEGG: reu:Reut_B3844 regulatory protein, LuxR; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal.
 
    0.779
AEB86190.1
UspA domain-containing protein; PFAM: UspA; Haemerythrin/HHE cation-binding motif; KEGG: reu:Reut_B3843 hypothetical protein.
 
   
 0.606
AEB86186.1
PFAM: Major facilitator superfamily MFS-1; KEGG: bph:Bphy_7178 major facilitator transporter.
 
   
 0.529
AEB86300.1
KEGG: cag:Cagg_1487 hypothetical protein.
 
    0.510
AEB82698.1
PFAM: Phenol hydroxylase subunit; KEGG: avn:Avin_30760 multi-component phenol hydoxylase, assembly subunit; LapK.
  
     0.500
AEB84050.1
KEGG: xtr:100489290 hypothetical protein LOC100489290.
  
   
 0.493
AEB86197.1
PFAM: Uncharacterised protein family UPF0324, prokaryote; KEGG: dac:Daci_1990 hypothetical protein.
 
     0.459
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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