STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86240.1KEGG: bpy:Bphyt_0617 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; UbiC transcription regulator-associated; SMART: HTH transcriptional regulator, GntR; UbiC transcription regulator-associated. (259 aa)    
Predicted Functional Partners:
AEB86239.1
KEGG: sti:Sthe_3003 formyl-CoA transferase; PFAM: CoA-transferase family III.
       0.773
AEB86238.1
KEGG: sti:Sthe_1794 acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal.
       0.737
AEB86236.1
MmgE/PrpD family protein; PFAM: MmgE/PrpD; KEGG: nmg:Nmag_3457 MmgE/PrpD family protein.
       0.730
AEB86237.1
PFAM: Crotonase, core; KEGG: pzu:PHZ_c3022 enoyl-CoA hydratase/isomerase family protein.
       0.721
AEB84081.1
Transcriptional regulator, GntR family with UTRA sensor domain; TIGRFAM: Histidine utilization repressor; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; KEGG: ctt:CtCNB1_0165 transcriptional regulator, histidine; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR.
  
     0.648
AEB85555.1
KEGG: bbr:BB0548 LacI family regulatory protein; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI.
  
   
 0.565
AEB84088.1
PFAM: Uncharacterised protein family HutD; KEGG: aav:Aave_2962 hypothetical protein.
  
  
 0.549
AEB86234.1
PFAM: Bacterial surface antigen (D15); KEGG: dia:Dtpsy_2883 surface antigen (D15).
       0.531
AEB86235.1
KEGG: ajs:Ajs_3559 hypothetical protein.
       0.531
AEB85232.1
GntR domain protein; KEGG: ctt:CtCNB1_0240 GntR-like protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR.
  
  
 0.520
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.