Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEB86267.1PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: dia:Dtpsy_2866 cobyrinic acid ac-diamide synthase. (206 aa)    
Predicted Functional Partners:
AEB83997.1
KEGG: rme:Rmet_1245 ParB family protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease.
 
 
 0.647
AEB83695.1
PFAM: Glycosyl transferase, family 2; KEGG: bpt:Bpet1524 glycosyltransferase.
  
 
 0.635
AEB84532.1
KEGG: dia:Dtpsy_3534 ParB domain protein nuclease; PFAM: ParB-like nuclease; SMART: ParB-like nuclease.
 
 
 0.633
AEB84387.1
KEGG: dia:Dtpsy_3217 DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase N-4/N-6; ParB-like nuclease; SMART: ParB-like nuclease; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.571
AEB86266.1
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_3544 lysine exporter protein LysE/YggA.
  
    0.555
AEB82499.1
TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: aav:Aave_0056 chromosome segregation DNA-binding protein; SMART: ParB-like nuclease; Belongs to the ParB family.
  
 
 0.551
AEB85126.1
PRTRC system ParB family protein; TIGRFAM: ParB-related, ThiF-related cassette, ParB; ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: ajs:Ajs_1591 ParB family protein; SMART: ParB-like nuclease; Belongs to the ParB family.
  
 
 0.551
AEB85635.1
PRTRC system ParB family protein; TIGRFAM: ParB-related, ThiF-related cassette, ParB; ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: ajs:Ajs_1591 ParB family protein; SMART: ParB-like nuclease; Belongs to the ParB family.
  
 
 0.551
AEB84128.1
Integrating conjugative element, PFGI-1, ParB; KEGG: tmz:Tmz1t_0997 hypothetical protein; manually curated; TIGRFAM: Integrating conjugative element, PFGI-1, ParB.
  
 
 0.550
AEB83701.1
Protein of unknown function YGGT; PFAM: Uncharacterised protein family Ycf19; KEGG: dia:Dtpsy_2595 protein of unknown function YGGT.
  
    0.453
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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