STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86290.1Hypothetical protein; KEGG: pna:Pnap_4649 IS1477 transposase. (80 aa)    
Predicted Functional Partners:
AEB86291.1
PFAM: Transposase IS3/IS911family; KEGG: pna:Pnap_4650 transposase IS3/IS911 family protein.
 
  
 0.812
AEB86289.1
PFAM: Transposase IS3/IS911family; KEGG: rfr:Rfer_2709 transposase IS3/IS911.
  
  
 0.643
AEB86288.1
PFAM: Transposase (putative), IS66 Orf2-like; KEGG: rfr:Rfer_2710 IS66 Orf2 like.
       0.619
AEB86287.1
PFAM: Transposase, IS66; KEGG: dia:Dtpsy_2523 transposase IS66.
       0.460
AEB82842.1
PFAM: Transposase IS3/IS911family; KEGG: pna:Pnap_4650 transposase IS3/IS911 family protein.
 
  
 0.454
AEB86176.1
PFAM: Transposase IS3/IS911family; KEGG: pna:Pnap_4650 transposase IS3/IS911 family protein.
 
  
 0.454
AEB86028.1
PFAM: Transposase IS3/IS911family; KEGG: pna:Pnap_4650 transposase IS3/IS911 family protein.
 
  
 0.450
AEB86137.1
PFAM: Integrase, catalytic core; KEGG: ajs:Ajs_3784 integrase catalytic subunit.
  
     0.435
AEB85054.1
PFAM: Transposase IS3/IS911family; KEGG: ajs:Ajs_1457 transposase IS3/IS911 family protein.
 
  
 0.430
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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