STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86298.1KEGG: dia:Dtpsy_0860 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain. (357 aa)    
Predicted Functional Partners:
AEB86297.1
KEGG: dia:Dtpsy_0859 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like.
 
 
 0.974
AEB86904.1
KEGG: ajs:Ajs_4043 FHA domain-containing protein; PFAM: Forkhead-associated (FHA) domain; SMART: Forkhead-associated (FHA) domain.
 
 
 
 0.934
AEB85368.1
KEGG: dia:Dtpsy_1901 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like.
 
 
 0.876
AEB86905.1
KEGG: ajs:Ajs_4044 protein phosphatase 2C domain-containing protein; PFAM: Protein phosphatase 2C, N-terminal; SMART: Protein phosphatase 2C-like.
 
 
 0.863
AEB83361.1
Hypothetical protein; Manually curated; KEGG: dia:Dtpsy_0829 hypothetical protein.
  
     0.718
AEB83677.1
KEGG: dia:Dtpsy_2621 putative transmembrane protein.
  
   
 0.713
AEB83831.1
Hypothetical protein; KEGG: dia:Dtpsy_1110 putative signal peptide protein.
  
     0.656
AEB86295.1
Nucleoside-triphosphatase rdgB; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
 
    0.638
rph
Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
       0.635
AEB83215.1
PFAM: Pilus assembly protein PilP; KEGG: dia:Dtpsy_0702 pilus assembly protein PilP.
  
     0.626
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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