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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86371.1KEGG: bav:BAV0225 exported protein. (320 aa)    
Predicted Functional Partners:
AEB86063.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: ajs:Ajs_3411 hypothetical protein.
 
  
 0.847
AEB84486.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: ajs:Ajs_1644 hypothetical protein.
 
  
 0.839
AEB86372.1
KEGG: bav:BAV0226 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal.
       0.773
AEB86370.1
PFAM: Extracellular ligand-binding receptor; KEGG: reu:Reut_B3887 UreA/short-chain amide ABC transporter.
       0.727
AEB86368.1
o-succinylbenzoate--CoA ligase; KEGG: bpt:Bpet0794 acyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase.
       0.534
AEB86369.1
KEGG: bbr:BB4035 putative oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR.
       0.534
AEB86367.1
Cyclase family protein; PFAM: Putative cyclase; KEGG: aav:Aave_3942 hypothetical protein.
       0.520
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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