Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEB86411.1PFAM: Heat shock protein DnaJ, N-terminal; KEGG: bvi:Bcep1808_3882 heat shock protein DnaJ domain-containing protein. (366 aa)    
Predicted Functional Partners:
AEB86410.1
TIGRFAM: Cysteine synthase K/M; Cysteine synthase A; KEGG: dac:Daci_1442 cysteine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.731
AEB82859.1
Glycosyltransferase; KEGG: dia:Dtpsy_0402 glycosyltransferase.
  
     0.576
AEB86412.1
PFAM: FAD dependent oxidoreductase; KEGG: dia:Dtpsy_3010 FAD dependent oxidoreductase.
 
     0.566
AEB83495.1
KEGG: rfr:Rfer_0701 hypothetical protein.
  
     0.541
AEB86409.1
KEGG: ajs:Ajs_3722 hypothetical protein.
       0.476
AEB85228.1
PFAM: Protein of unknown function DUF469; KEGG: dia:Dtpsy_1799 protein of unknown function DUF469.
  
     0.463
AEB83167.1
PFAM: General secretion pathway L; KEGG: ajs:Ajs_0670 general secretion pathway L.
  
   
 0.453
AEB85183.1
KEGG: dia:Dtpsy_1443 BFD domain protein (2Fe-2S)-binding domain protein; manually curated; PFAM: BFD-like [2Fe-2S]-binding domain.
  
     0.440
AEB83987.1
Helix-turn-helix domain protein; KEGG: rme:Rmet_1249 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
 
  
 0.435
AEB84541.1
KEGG: bpr:GBP346_A0950 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
 
  
 0.425
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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