STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86415.1Citryl-CoA lyase; KEGG: xtr:100489146 citrate lyase subunit beta-like; PFAM: Aldehyde-lyase domain; Belongs to the HpcH/HpaI aldolase family. (289 aa)    
Predicted Functional Partners:
AEB84670.1
PFAM: Class II aldolase/adducin, N-terminal; KEGG: vap:Vapar_5143 putative aldolase.
   
  
 0.717
AEB86416.1
KEGG: dac:Daci_3512 hypothetical protein.
       0.682
AEB86417.1
Formyl-CoA transferase; KEGG: dac:Daci_3513 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
  
    0.579
AEB86414.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3510 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.555
AEB86418.1
Amidohydrolase 2; KEGG: dac:Daci_3514 amidohydrolase 2; manually curated; PFAM: Amidohydrolase 2.
       0.519
AEB86419.1
KEGG: dac:Daci_3515 hypothetical protein.
       0.491
AEB82977.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rme:Rmet_4030 hypothetical protein.
  
  
 0.430
AEB84479.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cti:RALTA_B2224 putative metallothiol transferase.
  
  
 0.430
AEB82590.1
KEGG: dia:Dtpsy_0137 hypothetical protein.
  
  
 0.419
AEB83917.1
KEGG: bbr:BB0622 hypothetical protein.
  
  
 0.419
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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