STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86427.1PFAM: 2-nitropropane dioxygenase, NPD; KEGG: ajs:Ajs_3732 2-nitropropane dioxygenase, NPD. (324 aa)    
Predicted Functional Partners:
AEB86428.1
KEGG: dac:Daci_1400 hypothetical protein.
       0.780
AEB86426.1
KEGG: dia:Dtpsy_3012 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal.
  
  
 0.725
AEB86624.1
KEGG: ajs:Ajs_2100 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR.
  
  
 0.676
AEB86425.1
KEGG: dia:Dtpsy_2298 electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal.
       0.675
AEB86431.1
Enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; KEGG: xtr:100494378 probable enoyl-CoA hydratase paaG-like.
  
  
 0.657
AEB84657.1
PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: ajs:Ajs_1613 extradiol ring-cleavage dioxygenase III subunit B.
     
 0.646
AEB83715.1
PFAM: Cytochrome P450; KEGG: ajs:Ajs_3226 cytochrome P450.
      
 0.618
AEB86429.1
Formyl-CoA transferase; KEGG: ajs:Ajs_3734 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
  
    0.617
ilvC
Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.
 
    
 0.553
AEB86430.1
KEGG: mrb:Mrub_0164 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily.
     
 0.546
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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