Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB86430.1KEGG: mrb:Mrub_0164 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily. (140 aa)    
Predicted Functional Partners:
AEB86431.1
Enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; KEGG: xtr:100494378 probable enoyl-CoA hydratase paaG-like.
  
 
 0.705
AEB86429.1
Formyl-CoA transferase; KEGG: ajs:Ajs_3734 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
       0.701
AEB84460.1
KEGG: ajs:Ajs_1696 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily.
 
     0.567
AEB86427.1
PFAM: 2-nitropropane dioxygenase, NPD; KEGG: ajs:Ajs_3732 2-nitropropane dioxygenase, NPD.
     
 0.546
AEB86945.1
KEGG: dia:Dtpsy_3424 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily.
 
     0.546
AEB86435.1
3-hydroxybutyryl-CoA epimerase; KEGG: dac:Daci_1393 3-hydroxyacyl-CoA dehydrogenase NAD-binding; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.542
AEB86426.1
KEGG: dia:Dtpsy_3012 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal.
  
  
 0.527
AEB86428.1
KEGG: dac:Daci_1400 hypothetical protein.
       0.521
AEB86432.1
PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; KEGG: dac:Daci_1396 acyl-CoA dehydrogenase domain-containing protein.
  
  
 0.499
AEB86433.1
KEGG: ajs:Ajs_3737 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1.
  
  
 0.496
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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