Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB86458.1KEGG: ajs:Ajs_3757 hydroxymethylglutaryl-CoA lyase; PFAM: Pyruvate carboxyltransferase. (304 aa)    
Predicted Functional Partners:
AEB86462.1
PFAM: Crotonase, core; KEGG: ajs:Ajs_3761 enoyl-CoA hydratase.
 
 0.990
AEB84025.1
PFAM: Crotonase, core; KEGG: pol:Bpro_1631 enoyl-CoA hydratase/isomerase.
 
 0.953
AEB82618.1
PFAM: Crotonase, core; KEGG: vei:Veis_2207 enoyl-CoA hydratase/isomerase.
 
 
 0.949
AEB82451.1
PFAM: Crotonase, core; KEGG: reh:H16_A2138 enoyl-CoA hydratase/carnithine racemase.
 
 
 0.948
AEB82520.1
TIGRFAM: Acetoacetyl-CoA synthase; KEGG: dia:Dtpsy_0074 acetoacetyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase.
 
 
 0.932
AEB84963.1
SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: pna:Pnap_2658 3-oxoacid CoA-transferase, A subunit; PFAM: Coenzyme A transferase.
  
 
 0.930
AEB84962.1
SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; KEGG: dia:Dtpsy_1763 3-oxoacid CoA-transferase, B subunit; PFAM: Coenzyme A transferase.
  
 
 0.928
AEB83554.1
KEGG: azl:AZL_d00150 3-hydroxybutyrate dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.921
AEB85941.1
TIGRFAM: 3-hydroxybutyrate dehydrogenase; KEGG: dia:Dtpsy_2498 3-hydroxybutyrate dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.921
AEB82761.1
Aconitate hydratase domain-containing protein; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel; KEGG: cti:RALTA_B0856 putative hydrolyase.
  
  
 0.859
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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