Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEB86514.1KEGG: dia:Dtpsy_3077 flagellar export protein FliJ; TIGRFAM: Flagellar export FliJ; PFAM: Flagellar export FliJ. (154 aa)    
Predicted Functional Partners:
AEB86515.1
SMART: ATPase, AAA+ type, core; TIGRFAM: Flagellar export ATPase, FliI, clade 1; ATPase, type III secretion system, FliI/YscN; KEGG: dia:Dtpsy_3078 ATPase FliI/YscN; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain.
  
 
 0.993
AEB86513.1
PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: ajs:Ajs_3802 flagellar hook-length control protein.
  
  
 0.986
AEB86516.1
PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: dia:Dtpsy_3079 flagellar assembly protein FliH.
  
  
 0.974
AEB86517.1
KEGG: dia:Dtpsy_3080 flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG, C-terminal.
  
  
 0.970
AEB86512.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
  
 0.967
AEB86518.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.966
AEB86510.1
KEGG: dia:Dtpsy_3073 flagellar motor switch protein FliN; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA).
  
  
 0.963
AEB86509.1
PFAM: Flagellar biosynthesis protein, FliO; KEGG: dia:Dtpsy_3072 flagellar biosynthesis protein FliO.
  
  
 0.961
AEB86511.1
KEGG: dia:Dtpsy_3074 flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA).
  
  
 0.959
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
  
 0.948
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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