close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86556.1KEGG: dia:Dtpsy_3119 phenazine biosynthesis protein PhzF family; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein. (291 aa)    
Predicted Functional Partners:
AEB86557.1
Threonine ammonia-lyase; KEGG: dia:Dtpsy_3120 hypothetical protein; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit.
  
    0.813
AEB86555.1
PFAM: Aminotransferase, class I/classII; KEGG: ajs:Ajs_3845 GntR family transcriptional regulator.
  
  
 0.796
AEB86554.1
PFAM: Drug/metabolite transporter; KEGG: vap:Vapar_0746 protein of unknown function DUF6 transmembrane.
 
     0.666
AEB86553.1
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_3843 hypothetical protein.
       0.612
AEB86552.1
KEGG: dia:Dtpsy_3115 transcriptional regulator, GntR family with aminotransferase domain; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII; SMART: HTH transcriptional regulator, GntR.
 
  
 0.602
AEB85847.1
PFAM: UspA; KEGG: dia:Dtpsy_2423 UspA domain protein.
  
     0.471
AEB86558.1
KEGG: dia:Dtpsy_3121 hypothetical protein.
       0.464
AEB86693.1
TIGRFAM: Anthranilate synthase, glutamine amidotransferase domain; KEGG: dia:Dtpsy_0358 anthranilate synthase component II; PFAM: Glutamine amidotransferase class-I, C-terminal.
  
  
 0.419
AEB86559.1
PFAM: Extracellular ligand-binding receptor; KEGG: dia:Dtpsy_3122 extracellular ligand-binding receptor.
       0.405
AEB86560.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: dia:Dtpsy_3123 short-chain dehydrogenase/reductase SDR.
       0.405
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.