STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86566.1PFAM: Creatininase; KEGG: dia:Dtpsy_3125 creatininase. (285 aa)    
Predicted Functional Partners:
AEB83695.1
PFAM: Glycosyl transferase, family 2; KEGG: bpt:Bpet1524 glycosyltransferase.
  
  
 0.806
AEB86567.1
KEGG: dac:Daci_0588 hypothetical protein.
       0.743
AEB86565.1
KEGG: vap:Vapar_2119 hypothetical protein.
       0.533
AEB86568.1
Protein-disulfide reductase; KEGG: dia:Dtpsy_3127 cytochrome c biogenesis protein transmembrane region; PFAM: Cytochrome c assembly protein, transmembrane domain.
       0.461
AEB86407.1
Beta-lactamase domain protein; Manually curated; PFAM: Beta-lactamase-like; NUDIX hydrolase domain; KEGG: dia:Dtpsy_3001 beta-lactamase domain protein; SMART: Beta-lactamase-like.
  
     0.444
AEB86569.1
PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: vap:Vapar_0729 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
       0.402
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.