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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86643.1Peptidase S15; KEGG: cwo:Cwoe_3936 peptidase S15. (308 aa)    
Predicted Functional Partners:
AEB86645.1
3-hydroxybutyryl-CoA epimerase; Manually curated; KEGG: xtr:100493475 peroxisomal bifunctional enzyme-like; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.607
AEB86647.1
KEGG: reu:Reut_C6403 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR.
     
 0.586
AEB86646.1
TIGRFAM: Thiolase; KEGG: vap:Vapar_5357 acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; Belongs to the thiolase-like superfamily. Thiolase family.
       0.584
AEB86648.1
KEGG: psa:PST_1119 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase.
     
 0.584
AEB86644.1
PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; KEGG: slo:Shew_2868 acyl-CoA dehydrogenase domain-containing protein.
       0.578
AEB86649.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: azc:AZC_1416 sugar ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
       0.578
AEB86650.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: reu:Reut_B4134 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.578
AEB86651.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: reu:Reut_B4135 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.578
AEB86652.1
PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: azc:AZC_1419 ABC transporter sugar-binding protein.
       0.487
AEB86821.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: pol:Bpro_2144 carboxymuconolactone decarboxylase.
 
     0.458
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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