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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86656.1PFAM: Transposase, IS801/IS1294; KEGG: pol:Bpro_4805 putative transposase. (396 aa)    
Predicted Functional Partners:
AEB86654.1
Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: tmz:Tmz1t_0371 integrase family protein.
 
     0.596
AEB86655.1
Integrase family protein; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: tmz:Tmz1t_0370 integrase family protein; Belongs to the 'phage' integrase family.
 
     0.506
AEB83068.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dia:Dtpsy_0591 ABC transporter related; SMART: ATPase, AAA+ type, core.
  
 
 0.423
AEB83229.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dia:Dtpsy_0713 ABC transporter related; SMART: ATPase, AAA+ type, core.
  
 
 0.423
AEB84087.1
Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: pol:Bpro_1038 ABC transporter related; SMART: ATPase, AAA+ type, core.
  
 
 0.423
AEB85888.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: rso:RSc3408 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
  
 
 0.423
AEB85920.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: ajs:Ajs_3128 ABC transporter related; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
  
 
 0.423
AEB83225.1
KEGG: ajs:Ajs_0741 glutamate synthase (NADH) large subunit; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
     
 0.411
AEB83066.1
KEGG: dia:Dtpsy_0589 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
  
 
 0.405
AEB83067.1
Polar amino acid ABC transporter, inner membrane subunit; KEGG: ctt:CtCNB1_4180 glutamate/aspartate transport systempermease protein GltK; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
  
 
 0.405
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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