close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86716.1KEGG: lch:Lcho_2908 type IV pilus assembly protein PilX. (226 aa)    
Predicted Functional Partners:
AEB86715.1
KEGG: lch:Lcho_2907 type IV pilus assembly protein PilW.
  
  
 0.915
AEB86714.1
TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG: lch:Lcho_2906 hypothetical protein.
  
  
 0.906
AEB86712.1
KEGG: har:HEAR3117 putative type 4 fimbrial biogenesis transmembrane protein.
  
  
 0.859
AEB86717.1
KEGG: mep:MPQ_2531 pyrrolo-quinoline quinone; PFAM: Pyrrolo-quinoline quinone repeat; SMART: Pyrrolo-quinoline quinone beta-propeller repeat.
  
  
 0.837
AEB86713.1
KEGG: lch:Lcho_2905 Tfp pilus assembly protein FimT.
  
  
 0.832
AEB83600.1
PFAM: PilC domain; KEGG: dac:Daci_5197 FG-GAP repeat-containing protein.
  
  
 0.647
AEB83602.1
KEGG: dac:Daci_5195 hypothetical protein.
  
  
 0.629
AEB83599.1
KEGG: dia:Dtpsy_2540 fimbrial protein pilin.
  
  
 0.583
AEB83603.1
TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG: dac:Daci_5194 type IV pilus modification protein PilV.
  
  
 0.579
AEB86711.1
KEGG: rfr:Rfer_2221 hypothetical protein.
       0.481
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.