STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86745.1PFAM: Protein of unknown function DUF2214, membrane; KEGG: ajs:Ajs_0341 putative transmembrane protein. (151 aa)    
Predicted Functional Partners:
AEB84769.1
PFAM: Protein of unknown function DUF883, ElaB; KEGG: dia:Dtpsy_1647 protein of unknown function DUF883 ElaB.
  
     0.632
AEB86913.1
KEGG: ajs:Ajs_4052 putative lipoprotein transmembrane.
  
     0.572
AEB82549.1
PFAM: Cupin 2, conserved barrel; KEGG: aav:Aave_0177 cupin 2 domain-containing protein.
  
     0.565
dctA
C4-dicarboxylate transport protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.546
AEB86144.1
KEGG: ajs:Ajs_3652 hypothetical protein.
  
     0.476
AEB83144.1
KEGG: ctt:CtCNB1_3962 hypothetical protein.
 
     0.459
AEB86160.1
KEGG: dia:Dtpsy_2944 histone protein.
  
     0.430
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.