STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86749.1PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_0328 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (310 aa)    
Predicted Functional Partners:
AEB86748.1
KEGG: dac:Daci_2921 two component LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain.
  
  
 0.762
AEB86896.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rme:Rmet_4070 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.531
AEB84664.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: hmg:100212933 similar to lysR transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.511
AEB83415.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bbr:BB0990 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.508
AEB82547.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: aav:Aave_0175 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.499
AEB82521.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ajs:Ajs_0055 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.490
AEB83649.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bbr:BB0984 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.489
AEB85499.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rso:RS03179 transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.489
AEB83879.1
PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_B2640 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.487
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
       0.486
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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