STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86804.1Xaa-Pro aminopeptidase; KEGG: dia:Dtpsy_3306 peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal. (460 aa)    
Predicted Functional Partners:
AEB86803.1
TIGRFAM: Pyruvate kinase; KEGG: dia:Dtpsy_3305 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like; Belongs to the pyruvate kinase family.
  
  
 0.685
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
 
 
 0.619
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
 
 
 0.596
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 
 0.560
nudJ
PFAM: NUDIX hydrolase domain; KEGG: dia:Dtpsy_3425 NUDIX hydrolase; Belongs to the Nudix hydrolase family. NudJ subfamily.
 
   
 0.557
AEB86884.1
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: dia:Dtpsy_3367 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
 
 
 0.542
AEB85771.1
KEGG: dia:Dtpsy_2249 aminopeptidase N; TIGRFAM: Peptidase M1, alanyl aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal.
  
 
 0.535
AEB86808.1
Thiolase domain-containing protein; PFAM: Thiolase, C-terminal; KEGG: rme:Rmet_5111 thiolase.
  
 
 0.535
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 
 0.534
AEB86814.1
SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: ajs:Ajs_3960 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 
 
 0.534
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.