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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86807.1Formyl-CoA transferase; KEGG: xtr:100495402 caiB/baiF CoA-transferase family protein DDB_G0269880-like; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family. (392 aa)    
Predicted Functional Partners:
AEB86805.1
PFAM: Crotonase, core; KEGG: dac:Daci_0802 enoyl-CoA hydratase.
    
 0.786
AEB86806.1
KEGG: dac:Daci_0801 hypothetical protein.
  
    0.782
AEB86808.1
Thiolase domain-containing protein; PFAM: Thiolase, C-terminal; KEGG: rme:Rmet_5111 thiolase.
     
 0.778
AEB86809.1
PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal; KEGG: axy:AXYL_04666 hypothetical protein.
       0.775
AEB86810.1
KEGG: axy:AXYL_04659 extra-cytoplasmic solute receptor family protein 120.
  
    0.769
AEB86811.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: xtr:100494792 uncharacterized HTH-type transcriptional regulator ywbI-like; Belongs to the LysR transcriptional regulatory family.
       0.467
AEB86812.1
PFAM: Nucleotidyl transferase; KEGG: ajs:Ajs_3958 nucleotidyl transferase.
       0.467
AEB86804.1
Xaa-Pro aminopeptidase; KEGG: dia:Dtpsy_3306 peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal.
     
 0.444
AEB86814.1
SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: ajs:Ajs_3960 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
   0.404
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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