STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86809.1PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal; KEGG: axy:AXYL_04666 hypothetical protein. (133 aa)    
Predicted Functional Partners:
AEB86808.1
Thiolase domain-containing protein; PFAM: Thiolase, C-terminal; KEGG: rme:Rmet_5111 thiolase.
 
 0.974
AEB82609.1
Thiolase domain-containing protein; PFAM: Thiolase, C-terminal; KEGG: ajs:Ajs_0129 thiolase.
 
 0.894
AEB83563.1
KEGG: axy:AXYL_06648 thiolase, C-terminal domain-containing protein 10.
 
 0.892
AEB82577.1
KEGG: reh:H16_A2148 acetyl-CoA acetyltransferase.
 
 
 0.890
AEB84221.1
KEGG: reh:H16_A1297 acetyl-CoA acetyltransferase.
 
 
 0.890
AEB85560.1
KEGG: bbr:BB0546 acetyl-CoA acetyltransferase.
 
 
 0.890
AEB86835.1
Thiolase; KEGG: ajs:Ajs_3972 thiolase.
 
 
 0.889
AEB83568.1
KEGG: vei:Veis_4266 hypothetical protein.
 
 
 0.887
AEB86807.1
Formyl-CoA transferase; KEGG: xtr:100495402 caiB/baiF CoA-transferase family protein DDB_G0269880-like; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
       0.775
AEB86810.1
KEGG: axy:AXYL_04659 extra-cytoplasmic solute receptor family protein 120.
       0.773
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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