close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86810.1KEGG: axy:AXYL_04659 extra-cytoplasmic solute receptor family protein 120. (335 aa)    
Predicted Functional Partners:
AEB86063.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: ajs:Ajs_3411 hypothetical protein.
  
 0.823
AEB86806.1
KEGG: dac:Daci_0801 hypothetical protein.
 
    
0.809
AEB86808.1
Thiolase domain-containing protein; PFAM: Thiolase, C-terminal; KEGG: rme:Rmet_5111 thiolase.
       0.773
AEB86809.1
PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal; KEGG: axy:AXYL_04666 hypothetical protein.
       0.773
AEB86807.1
Formyl-CoA transferase; KEGG: xtr:100495402 caiB/baiF CoA-transferase family protein DDB_G0269880-like; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
  
    0.769
AEB86805.1
PFAM: Crotonase, core; KEGG: dac:Daci_0802 enoyl-CoA hydratase.
       0.768
AEB84486.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: ajs:Ajs_1644 hypothetical protein.
  
 0.714
AEB86811.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: xtr:100494792 uncharacterized HTH-type transcriptional regulator ywbI-like; Belongs to the LysR transcriptional regulatory family.
       0.470
AEB86812.1
PFAM: Nucleotidyl transferase; KEGG: ajs:Ajs_3958 nucleotidyl transferase.
       0.470
AEB86064.1
KEGG: dia:Dtpsy_2746 protein of unknown function DUF1468.
 
  
 0.450
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.