STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86819.1KEGG: pol:Bpro_2146 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR. (276 aa)    
Predicted Functional Partners:
AEB86818.1
PFAM: Amidohydrolase 2; KEGG: pol:Bpro_2147 amidohydrolase 2.
 
     0.711
AEB86821.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: pol:Bpro_2144 carboxymuconolactone decarboxylase.
 
   
 0.618
AEB86223.1
KEGG: app:CAP2UW1_1324 oxidoreductase FAD-binding domain protein; PFAM: Oxidoreductase, FAD-binding domain; Ferredoxin; Cytochrome b/b6, N-terminal; Oxidoreductase FAD/NAD(P)-binding.
  
 
 0.613
AEB86820.1
KEGG: pol:Bpro_2145 hypothetical protein.
       0.598
AEB86822.1
KEGG: pol:Bpro_2143 hypothetical protein.
     
 0.545
AEB82732.1
PFAM: Alpha/beta hydrolase fold-1; KEGG: axy:AXYL_03189 alpha/beta hydrolase fold family protein 10.
 
 0.469
AEB82656.1
KEGG: axy:AXYL_03188 hypothetical protein.
 
 0.466
AEB83428.1
Acetolactate synthase; KEGG: ajs:Ajs_3488 hypothetical protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain.
 
 0.465
AEB82655.1
PFAM: Alpha/beta hydrolase fold-1; KEGG: axy:AXYL_03189 alpha/beta hydrolase fold family protein 10.
 
 0.459
AEB82731.1
KEGG: axy:AXYL_03188 hypothetical protein.
 
 0.457
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.